Research portfolio

Projects

Selected research projects in medical image computing, structural representation learning, and generative modeling.

MIDL 2023 · PMLR Vol. 227

VesselFormer

Towards Complete 3D Vessel Graph Generation from Images

Directly predicting radius-aware 3D vessel graphs from images and merging patch-wise predictions into full-volume networks.

VesselFormer pipeline from Figure 2 of the published paper
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Published paper Figure 2.

MIDL 2023 · PMLR Vol. 227

ViT-AE++

Improving Vision Transformer Autoencoder for Self-supervised Medical Image Representations

Self-supervised medical image learning with masked reconstruction, structure-aware losses and contrastive masked views.

Original paper Figure 1

MICCAI 2023

Self-Pruning Graph Neural Network

Self-Pruning Graph Neural Network for Predicting Inflammatory Disease Activity in Multiple Sclerosis from Brain MR Images

Learning a patient-specific lesion graph from brain MRI and identifying the lesions most relevant to predicting future inflammatory activity.

Figure 1 from original self-pruning GNN MICCAI 2023 paper
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Original MICCAI 2023 Figure 1.

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